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GrainGenes Marker Report: MWG798B

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Locus
MWG798B
Type
RFLP
Synonym
SynonymMWG798
Chromosome
3H
Map
[ Hide all but 1 of 20 ]
Barley-Consensus2-3H17.4
Hordeum-Bins-3H31
Hordeum-Consensus2005-SNP-3H23.534
Hordeum-Consensus2006-DArT-3H35.3
Hordeum-Consensus2007-SSR-3H26.45
Hordeum-NABGMP1-3H25.3
Hordeum-OPA-2009-3H42.88
Hordeum-OWB-2004-3H35.8
Hordeum-OWB-2005-3H35.6
Hordeum-OWB-OPA2008-3H31.839
Hordeum-PilotOPA1-3H30.55
Hordeum-QTLConsensus-Abiotic-3H23.53
Hordeum-QTLConsensus-Agronomic-3H23.53
Hordeum-StMo-SNP-3H24.06
Hordeum-SxM-base-3H25.8
Hordeum-SxM-FeedQTL-3H25.3
Hordeum-SxM-SSAP-3H25.6
Hordeum-SxM-SSR-3H23.1
Hv-Consensus2006-Marcel-3H26.45
Hv-Integrated2009-3H37.7
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 20 ]
Species
Hordeum vulgare
Probe
MWG798
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 7 ]
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of MWG798B in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
MWG798
[ Show all 7 ]
Probe for Locus
MWG798
Locus
MWG798A
[ Show all 8 ]
Reference
ReferenceGraner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
Genomic
STS
STS primers
5' GGCTGTCTACATCTTCTGCA
5' CAAGTGTTGAGAAGGAGAGT
STS size
365
Amplification Conditions
STS annealing temperature 55-58 oC
Sequence
AJ234554
AJ234553
MWG798-5
MWG798-3
Insert Enzyme
PstI
Source Species
Hordeum vulgare