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GrainGenes Marker Report: MWG878

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Locus	MWG878
Type	RFLP
Chromosome	2H
Chromosome Arm	2HS
Map	[ Hide all but 1 of 16 ] Barley-Consensus-2H -54.6 Barley-Consensus2-2H 22.5 Barley-ConsensusFHB-2H 16.33 Hordeum-Consensus2006-DArT-2H 18.8 Hordeum-Consensus2007-SSR-2H 18.99 Hordeum-FxS-FHB-QTL-2H 0 Hordeum-Giese2-2H 6 Hordeum-Graner2-2H 19 Hordeum-IxF-SSR-2H 9.2 Hordeum-KxM-2H 58.9 Hordeum-OPA-2009-2H 21.19 Hordeum-SxM-base-2H 16.6 Hordeum-SxM-SSAP-2H 24.4 Hordeum-SxM-SSR-2H 22.6 Hv-Consensus2006-Marcel-2H 18.99 Hv-Integrated2009-2H 16.9
	[ Show Nearby Loci ]
QTL with Locus Marker	QTil.TyVo-2H.1
Map Data	Barley consensus [ Show all 18 ]
Species	Hordeum vulgare
Probe	MWG878
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 6 ]
Remark	Number of populations contributing to the placement of MWG878 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	MWG878-2H [ Show all 7 ]
Probe	MWG878
Locus	MWG878 [ Show all 8 ]
Synonym	Synonym HAR35_11279 HAR35_28024 HAR35_45298
Type	Genomic STS
STS primers	5' CTGTCTGCTTGTGCAAATGG 5' GCTTGAATCTGGTATGGTGC
STS size	272
Amplification Conditions	STS annealing temperature 52-55 oC
Sequence	AJ234611 AJ234610 MWG878-5 MWG878-3
Linkage Group	2H
Insert Enzyme	PstI
Source Species	Hordeum vulgare
Insert Size	1.8