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GrainGenes Marker Report: Nir

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Gene	nir
Gene Product	ferredoxin-nitrite reductase precursor
Sequence	FJ527909 FJ527909_1.cds FJ555239 FJ555239_1.cds
Locus	Nir
Type	Gene RFLP
Synonym	Synonym Nir (Hordeum)
Chromosome	6H
Chromosome Arm	6HL
Map	[ Hide all but 1 of 11 ] Barley-Consensus-6H 23.6 Barley-Consensus2-6H 92.6 Hordeum-Bins-6H 96.9 Hordeum-Consensus2005-SNP-6H 100.217 Hordeum-NABGMP2-6H 109.5 Hordeum-QTLConsensus-Abiotic-6H 100.22 Hordeum-QTLConsensus-Agronomic-6H 100.22 Hordeum-StMo-SNP-6H 91.64 Hordeum-SxM-SSR-6H 105.9 Hv-Consensus2006-Marcel-6H 86.37 Hv-Integrated2009-6H 88.1
	[ Show Nearby Loci ]
QTL with Locus Marker	QAa.StMo-6H
Map Data	Barley consensus [ Show all 13 ]
Probe	pCIB808
Associated Gene	Nir (Hordeum)
Candidate Gene	Nir (Hordeum)
Gene Class	Nitrite reductase
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Probe for Locus	pCIB808
Locus	Nir
Reference	Lahners K et al. (1988) Molecular cloning of complementary DNA encoding maize nitrite reductase. Plant Physiology 88:741-746.
Linkage Group	6
Source Gene Class	Nitrite reductase
Source Species	Zea mays
Insert Size	1.85