GrainGenes Marker Report: POPA1_0033
Locus
POPA1_0033
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_529
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0033 Most representative HarvEST:Barley Assembly #32 Unigene = 1097 Most representative HarvEST:Barley Assembly #35 Unigene = 529 HarvEST Unigene 35 Probe Set = Contig1646_at; Contig1646_s_at Unigene 35 Rice Locus = LOC_Os03g12290 Description for best rice BLAST hit to Unigene 35 member = glutamine synthetase root isozyme 5, putative, expressed; E value = 0 BLAST hit in the rice genome = glutamine synthetase root isozyme 5, putative, expressed
Probe for Locus
HAR35_529
Locus
POPA3_0904 POPA3_0905 POPA3_0906 POPA1_0033 POPA2_0055
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_0033
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