GrainGenes Marker Report: POPA1_0037
Locus
POPA1_0037
Type
SNP
Chromosome
4H
Map
Barley-Core-2014_4H 53.87 Hordeum-OPAConsensus-2011-4H 56.22
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, USDA Core, 2014 Consensus
Probe
HAR35_14582
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0037 Most representative HarvEST:Barley Assembly #32 Unigene = 1119 Most representative HarvEST:Barley Assembly #35 Unigene = 14582 HarvEST Unigene 35 Probe Set = Contig1668_at; Contig1671_at Unigene 35 Rice Locus = LOC_Os03g18570 Description for best rice BLAST hit to Unigene 35 member = 40S ribosomal protein S7, putative, expressed; E value = 5E-99 BLAST hit in the rice genome = 40S ribosomal protein S7, putative, expressed
Probe for Locus
HAR35_14582
Locus
POPA1_0037 POPA2_0065
GrainGenes Marker Report: POPA1_0037
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