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GrainGenes Marker Report: POPA1_0091

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Locus
POPA1_0091
Type
SNP
Synonym
Synonym12_10091
Chromosome
1H
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14821
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ]
Marker name in barley Pilot OPA1 = 1_0091
Marker name in barley OPA1 = 12_10091
Original SNP name = 1378-430
Most representative HarvEST:Barley Assembly #32 Unigene = 1378
Most representative HarvEST:Barley Assembly #35 Unigene = 14821
HarvEST Unigene 35 Probe Set = Contig2047_s_at
Unigene 35 Rice Locus = LOC_Os02g57540
Description for best rice BLAST hit to Unigene 35 member = 60S ribosomal protein L28, putative, expressed; E value = 3E-68
BLAST hit in the rice genome = 60S ribosomal protein L28, putative, expressed



Probe for Locus
HAR35_14821
Locus
POPA1_0091