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GrainGenes Marker Report: POPA1_0117

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Locus
POPA1_0117
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14034
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_0117
Most representative HarvEST:Barley Assembly #32 Unigene = 1524
Most representative HarvEST:Barley Assembly #35 Unigene = 14034
HarvEST Unigene 35 Probe Set = Contig2229_at; Contig2231_s_at; HT07O19u_s_at
Unigene 35 Rice Locus = LOC_Os02g16040
Description for best rice BLAST hit to Unigene 35 member = ubiquitin-conjugating enzyme E2-17 kDa, putative, expressed; E value = 1E-82
BLAST hit in the rice genome = ubiquitin-conjugating enzyme E2-17 kDa, putative, expressed



Probe for Locus
HAR35_14034
Locus
POPA1_0117