GrainGenes Marker Report: POPA1_0250
Locus
POPA1_0250
Type
SNP
Chromosome
1H
Map
Barley-Core-2014_1H 36.02 Hordeum-OPAConsensus-2011-1H 30.15
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, USDA Core, 2014 Consensus
Probe
HAR35_15460
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0250 Most representative HarvEST:Barley Assembly #32 Unigene = 2215 Most representative HarvEST:Barley Assembly #35 Unigene = 15460 HarvEST Unigene 35 Probe Set = Contig3215_s_at; Contig3216_at Unigene 35 Rice Locus = LOC_Os02g41904 Description for best rice BLAST hit to Unigene 35 member = low-molecular-weight cysteine-rich protein LCR69 precursor, putative, expressed; E value = 8E-24 BLAST hit in the rice genome = low-molecular-weight cysteine-rich protein LCR69 precursor, putative, expressed
Probe for Locus
HAR35_15460
Locus
POPA1_0250
GrainGenes Marker Report: POPA1_0250
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