GrainGenes Marker Report: POPA1_0258
Locus
POPA1_0258
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_2054
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0258 Most representative HarvEST:Barley Assembly #32 Unigene = 2263 Most representative HarvEST:Barley Assembly #35 Unigene = 2054 HarvEST Unigene 35 Probe Set = Contig3300_at; EBed01_SQ003_L20_s_at Unigene 35 Rice Locus = LOC_Os05g33570 Description for best rice BLAST hit to Unigene 35 member = pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed; E value = 1E-115 BLAST hit in the rice genome = pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed
Probe for Locus
HAR35_2054
Locus
POPA1_0258
Synonym
Synonym BCD454
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_0258
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