GrainGenes Marker Report: POPA1_0304
Locus
POPA1_0304
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_15516
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0304 Most representative HarvEST:Barley Assembly #32 Unigene = 2464 Most representative HarvEST:Barley Assembly #35 Unigene = 15516 HarvEST Unigene 35 Probe Set = Contig3557_at Unigene 35 Rice Locus = LOC_Os04g56646 Description for best rice BLAST hit to Unigene 35 member = expressed protein; E value = 7E-71 BLAST hit in the rice genome = expressed protein
Probe for Locus
HAR35_15516
Locus
POPA2_0366 POPA1_0304
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_0304
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