GrainGenes Marker Report: POPA1_0320
Locus
POPA1_0320
Type
SNP
Chromosome
3H
Map
Barley-Core-2014_3H 122.12 Hordeum-OPAConsensus-2011-3H 141.22
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, USDA Core, 2014 Consensus
Probe
HAR35_1387
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0320 Most representative HarvEST:Barley Assembly #32 Unigene = 2546 Most representative HarvEST:Barley Assembly #35 Unigene = 1387 HarvEST Unigene 35 Probe Set = Contig3650_at; Contig3650_s_at Unigene 35 Rice Locus = LOC_Os01g69040 Description for best rice BLAST hit to Unigene 35 member = ubiquitin-protein ligase/ zinc ion binding protein, putative, expressed; E value = 9E-64 BLAST hit in the rice genome = ubiquitin-protein ligase/ zinc ion binding protein, putative, expressed
Probe for Locus
HAR35_1387
Locus
POPA1_0320
GrainGenes Marker Report: POPA1_0320
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