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GrainGenes Marker Report: POPA1_0364

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Locus
POPA1_0364
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_15787
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_0364
Most representative HarvEST:Barley Assembly #32 Unigene = 2747
Most representative HarvEST:Barley Assembly #35 Unigene = 15787
HarvEST Unigene 35 Probe Set = Contig3956_at; Contig3958_s_at
Unigene 35 Rice Locus = LOC_Os06g43590
Description for best rice BLAST hit to Unigene 35 member = charged multivesicular body protein 1b, putative, expressed; E value = 1E-104
BLAST hit in the rice genome = charged multivesicular body protein 1b, putative, expressed



Probe for Locus
HAR35_15787
Locus
POPA2_0407
POPA1_0364