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GrainGenes Marker Report: POPA1_0435

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Locus
POPA1_0435
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_1446
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_0435
Most representative HarvEST:Barley Assembly #32 Unigene = 3209
Most representative HarvEST:Barley Assembly #35 Unigene = 1446
HarvEST Unigene 35 Probe Set = Contig4561_at; HVSMEk0005D04r2_s_at
Unigene 35 Rice Locus = LOC_Os02g21970
Description for best rice BLAST hit to Unigene 35 member = 26S protease regulatory subunit 6B, putative, expressed; E value = 0
BLAST hit in the rice genome = 26S protease regulatory subunit 6B, putative, expressed



Probe for Locus
HAR35_1446
Locus
POPA1_0435
POPA2_0499