Query (optional)   in Class  

GrainGenes Marker Report: POPA1_0453

[Submit comment/correction]

Locus
POPA1_0453
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_1561
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_0453
Most representative HarvEST:Barley Assembly #32 Unigene = 3334
Most representative HarvEST:Barley Assembly #35 Unigene = 1561
HarvEST Unigene 35 Probe Set = Contig18234_at; Contig4711_s_at
Unigene 35 Rice Locus = LOC_Os06g49430
Description for best rice BLAST hit to Unigene 35 member = OsMPK17-1 - putative MAPK based on amino acid sequence homology, expressed; E value = 0
BLAST hit in the rice genome = OsMPK17-1 - putative MAPK based on amino acid sequence homology, expressed



Probe for Locus
HAR35_1561
Locus
POPA1_0453