GrainGenes Marker Report: POPA1_0454
Locus
POPA1_0454
Type
SNP
Synonym
Other name 11_10454 BOPA1_11_10454 BOPA1_3345-247 Synonym 11_10454
Chromosome
7H
Chromosome Arm
7HL
Map
Hordeum-OPA-2009-7H 140.21 Hordeum-OPA123-2008-7H 140.21 Hordeum-OPAConsensus-2011-7H 139.9
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_13724 i_11_10454
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 1_0454 Marker name in barley OPA1 = 11_10454 Original SNP name = 3345-247 Most representative HarvEST:Barley Assembly #32 Unigene = 3345 Most representative HarvEST:Barley Assembly #35 Unigene = 13724 HarvEST Unigene 35 Probe Set = Contig4741_s_at Unigene 35 Rice Locus = LOC_Os06g43860 Description for best rice BLAST hit to Unigene 35 member = homeobox protein knotted-1-like 3, putative, expressed; E value = 1E-120 Original SNP name = U35_18761_884 Description for best rice BLAST hit to Unigene 35 member = protein homeobox protein knotted-1-like 3, putative, expressed; E value = 1E-120 BLAST hit in the rice genome = homeobox protein knotted-1-like 3, putative, expressed
Probe for Locus
HAR35_13724
Locus
POPA1_0454 POPA2_0530
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_0454
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