GrainGenes Marker Report: POPA1_0478
Locus
POPA1_0478
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_16239
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0478 Most representative HarvEST:Barley Assembly #32 Unigene = 3483 Most representative HarvEST:Barley Assembly #35 Unigene = 16239 HarvEST Unigene 35 Probe Set = Contig4873_s_at Unigene 35 Rice Locus = LOC_Os03g63950 Description for best rice BLAST hit to Unigene 35 member = plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed; E value = 1E-100 BLAST hit in the rice genome = plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed
Probe for Locus
HAR35_16239
Locus
POPA1_0478 POPA2_0569
Synonym
Synonym BCD197
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_0478
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