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GrainGenes Marker Report: POPA1_0512

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Locus
POPA1_0512
Type
SNP
Chromosome
1H
Map
Barley-Core-2014_1H142.16
Hordeum-OPAConsensus-2011-1H138.86
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, USDA Core, 2014 Consensus
Probe
HAR35_15924
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_0512
Most representative HarvEST:Barley Assembly #32 Unigene = 3655
Most representative HarvEST:Barley Assembly #35 Unigene = 15924
HarvEST Unigene 35 Probe Set = Contig5148_at
Unigene 35 Rice Locus = LOC_Os05g51140
Description for best rice BLAST hit to Unigene 35 member = expressed protein; E value = 1E-172
BLAST hit in the rice genome = expressed protein



Probe for Locus
HAR35_15924
Locus
POPA1_0512