GrainGenes Marker Report: POPA1_0540
Locus
POPA1_0540
Type
SNP
Chromosome
7H
Map
Barley-Core-2014_7H 110.97 Hordeum-OPAConsensus-2011-7H 111.49
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, USDA Core, 2014 Consensus
Probe
HAR35_16448
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0540 Most representative HarvEST:Barley Assembly #32 Unigene = 3783 Most representative HarvEST:Barley Assembly #35 Unigene = 16448 HarvEST Unigene 35 Probe Set = Contig5248_s_at; Contig5249_at Unigene 35 Rice Locus = LOC_Os06g47150 Description for best rice BLAST hit to Unigene 35 member = auxin response factor 16, putative, expressed; E value = 1E-178 BLAST hit in the rice genome = auxin response factor 16, putative, expressed
Probe for Locus
HAR35_16448
Locus
POPA2_0623 POPA1_0540
GrainGenes Marker Report: POPA1_0540
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