GrainGenes Marker Report: POPA1_0560
Locus
POPA1_0560
Type
SNP
Chromosome
2H
Map
Barley-Core-2014_2H 110.58 Hordeum-OPAConsensus-2011-2H 118.39
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, USDA Core, 2014 Consensus
Probe
HAR35_2123
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_0560 Most representative HarvEST:Barley Assembly #32 Unigene = 3890 Most representative HarvEST:Barley Assembly #35 Unigene = 2123 HarvEST Unigene 35 Probe Set = Contig5401_s_at; HT10L13u_s_at Unigene 35 Rice Locus = LOC_Os04g52130 Description for best rice BLAST hit to Unigene 35 member = coproporphyrinogen III oxidase, chloroplast precursor, putative, expressed; E value = 0 BLAST hit in the rice genome = coproporphyrinogen III oxidase, chloroplast precursor, putative, expressed
Probe for Locus
HAR35_2123
Locus
POPA1_0560
GrainGenes Marker Report: POPA1_0560
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