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GrainGenes Marker Report: POPA1_0594

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Locus
POPA1_0594
Type
SNP
Chromosome
6H
Map
Barley-Core-2014_6H58.91
Hordeum-OPAConsensus-2011-6H60.65
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, USDA Core, 2014 Consensus
Probe
HAR35_15186
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_0594
Most representative HarvEST:Barley Assembly #32 Unigene = 4071
Most representative HarvEST:Barley Assembly #35 Unigene = 15186
HarvEST Unigene 35 Probe Set = Contig5663_at
Unigene 35 Rice Locus = LOC_Os06g39750
Description for best rice BLAST hit to Unigene 35 member = fatty acid elongase, putative, expressed; E value = 0
BLAST hit in the rice genome = fatty acid elongase, putative, expressed



Probe for Locus
HAR35_15186
Locus
POPA1_0594