GrainGenes Marker Report: POPA1_0631
Locus
POPA1_0631
Type
SNP
Synonym
Synonym 11_10631
Chromosome
3H
Chromosome Arm
3HL
Map
Hordeum-OPA-2009-3H 144.64 Hordeum-OPA123-2008-3H 144.64 Hordeum-OPAConsensus-2011-3H 153.61
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Probe
HAR35_2650
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 1_0631 Marker name in barley OPA1 = 11_10631 Original SNP name = 4270-184 Most representative HarvEST:Barley Assembly #32 Unigene = 4270 Most representative HarvEST:Barley Assembly #35 Unigene = 2650 HarvEST Unigene 35 Probe Set = Contig5986_s_at; Contig5987_at Unigene 35 Rice Locus = Description for best rice BLAST hit to Unigene 35 member = ; E value = HarvEST Unigene 35 Probe Set = Contig5986_s_at, Contig5987_at
Probe for Locus
HAR35_2650
Locus
POPA1_0631
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_0631
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