GrainGenes Marker Report: POPA1_0730
Locus
POPA1_0730
Type
SNP
Chromosome
1H
Chromosome Arm
1HS
Map
Hordeum-OPA-2009-1H 6.03 Hordeum-OPA123-2008-1H 6.03
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe
HAR35_1635
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 1_0730 Most representative HarvEST:Barley Assembly #32 Unigene = 5053 Most representative HarvEST:Barley Assembly #35 Unigene = 1635 HarvEST Unigene 35 Probe Set = Contig7007_s_at; Contig7008_at Unigene 35 Rice Locus = LOC_Os06g31280 Description for best rice BLAST hit to Unigene 35 member = leaf-specific thionin BTH6 precursor, putative; E value = 0.00000000003 Original SNP name = 5053-456 Original SNP name = SCRI_bbc00931_01_2 HarvEST Unigene 35 Probe Set = Contig7007_s_at, Contig7008_at Description for best rice BLAST hit to Unigene 35 member = protein leaf-specific thionin BTH6 precursor, putative; E value = 0.00000000003 BLAST hit in the rice genome = leaf-specific thionin BTH6 precursor, putative
Probe for Locus
HAR35_1635
Locus
POPA1_0730 POPA2_0865
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_0730
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
| ||||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
| |||||||||||||
|
|