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GrainGenes Marker Report: POPA1_0731

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Locus	POPA1_0731
Type	SNP
Synonym	Other name 11_10731 BOPA1_11_10731 BOPA1_5088-59 Synonym 11_10731
Chromosome	2H
Chromosome Arm	2HL
Map	Barley, 2012 9KSNP 2H 107.2 Hordeum-OPA-2009-2H 113.48 Hordeum-OPA123-2008-2H 113.48 Hordeum-OPAConsensus-2011-2H 124.98
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Map Data	Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species	Hordeum vulgare
Probe	HAR35_3084 i_11_10731
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 1_0731 Marker name in barley OPA1 = 11_10731 Original SNP name = 5088-59 Most representative HarvEST:Barley Assembly #32 Unigene = 5088 Most representative HarvEST:Barley Assembly #35 Unigene = 3084 HarvEST Unigene 35 Probe Set = AF069331_s_at; Contig6859_at Unigene 35 Rice Locus = Description for best rice BLAST hit to Unigene 35 member = ; E value = HarvEST Unigene 35 Probe Set = AF069331_s_at, Contig6859_at
Probe for Locus	HAR35_3084
Locus	POPA1_0731
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare