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GrainGenes Marker Report: POPA1_0956

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Locus	POPA1_0956
Type	SNP
Synonym	Other name 11_10956 BOPA1_11_10956 BOPA1_8142-676 Synonym 11_10956
Chromosome	7H
Chromosome Arm	7HS
Map	Hordeum-OPAConsensus-2011-7H 27.69
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Species	Hordeum vulgare
Probe	HAR35_18584 i_11_10956
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 1_0956 Marker name in barley OPA1 = 11_10956 Original SNP name = 8142-676 Most representative HarvEST:Barley Assembly #32 Unigene = 8142 Most representative HarvEST:Barley Assembly #35 Unigene = 18584 HarvEST Unigene 35 Probe Set = Contig10573_s_at Unigene 35 Rice Locus = LOC_Os06g05740 Description for best rice BLAST hit to Unigene 35 member = expressed protein; E value = 1E-124 BLAST hit in the rice genome = expressed protein
Probe for Locus	HAR35_18584
Locus	POPA1_0956