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GrainGenes Marker Report: POPA1_0986

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Locus
POPA1_0986
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_5030
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_0986
Most representative HarvEST:Barley Assembly #32 Unigene = 8643
Most representative HarvEST:Barley Assembly #35 Unigene = 5030
HarvEST Unigene 35 Probe Set = Contig10891_at; Contig10891_s_at; Contig10892_at
Unigene 35 Rice Locus = LOC_Os08g32090
Description for best rice BLAST hit to Unigene 35 member = ATP-dependent RNA helicase DDX54, putative, expressed; E value = 1E-170
BLAST hit in the rice genome = ATP-dependent RNA helicase DDX54, putative, expressed



Probe for Locus
HAR35_5030
Locus
POPA1_0986