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GrainGenes Marker Report: POPA1_1003

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Locus
POPA1_1003
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_18784
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_1003
Most representative HarvEST:Barley Assembly #32 Unigene = 9037
Most representative HarvEST:Barley Assembly #35 Unigene = 18784
HarvEST Unigene 35 Probe Set = Contig11677_s_at; Contig11678_at
Unigene 35 Rice Locus = LOC_Os09g07480
Description for best rice BLAST hit to Unigene 35 member = expressed protein; E value = 5E-44
BLAST hit in the rice genome = expressed protein



Probe for Locus
HAR35_18784
Locus
POPA1_1003