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GrainGenes Marker Report: POPA1_1006

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Locus
POPA1_1006
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14134
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_1006
Most representative HarvEST:Barley Assembly #32 Unigene = 921
Most representative HarvEST:Barley Assembly #35 Unigene = 14134
HarvEST Unigene 35 Probe Set = Contig1383_s_at
Unigene 35 Rice Locus = LOC_Os05g11320
Description for best rice BLAST hit to Unigene 35 member = metallothionein-like protein type 3, putative, expressed; E value = 8E-22
BLAST hit in the rice genome = metallothionein-like protein type 3, putative, expressed



Probe for Locus
HAR35_14134
Locus
POPA2_1402
POPA1_1006