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GrainGenes Marker Report: POPA1_1020

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Locus	POPA1_1020
Type	SNP
Synonym	Other name 12_11020 BOPA2_12_11020 Synonym 12_11020
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_14375 i_12_11020
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 8 ] Marker name in barley Pilot OPA1 = 1_1020 Marker name in barley OPA1 = 12_11020 Original SNP name = 961-2471 Most representative HarvEST:Barley Assembly #32 Unigene = 961 Most representative HarvEST:Barley Assembly #35 Unigene = 14375 HarvEST Unigene 35 Probe Set = Contig1424_at Unigene 35 Rice Locus = LOC_Os12g42876 BLAST hit in the rice genome = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed
Probe for Locus	HAR35_14375
Locus	POPA1_1020