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GrainGenes Marker Report: POPA1_1044

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Locus	POPA1_1044
Type	SNP
Synonym	Other name 12_11044 BOPA2_12_11044 Synonym 12_11044
Chromosome	7H
Map	Hordeum-OPAConsensus-2011-7H 97.65
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Species	Hordeum vulgare
Probe	HAR35_14154 i_12_11044
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 8 ] Marker name in barley Pilot OPA1 = 1_1044 Marker name in barley OPA1 = 12_11044 Original SNP name = ABC01382-pHv1042-02 Most representative HarvEST:Barley Assembly #32 Unigene = 922 Most representative HarvEST:Barley Assembly #35 Unigene = 14154 HarvEST Unigene 35 Probe Set = Contig1382_at; Contig1386_s_at Unigene 35 Rice Locus = LOC_Os06g49480 BLAST hit in the rice genome = peptidyl-prolyl cis-trans isomerase CYP19-4 precursor, putative, expressed
Probe for Locus	HAR35_14154
Locus	POPA1_1044