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GrainGenes Marker Report: POPA1_1068

Locus	POPA1_1068
Type	SNP
Synonym	Synonym 11_11068
Chromosome	7H
Chromosome Arm	7HS
Map	Hordeum-OPA-2009-7H 37.55 Hordeum-OPA123-2008-7H 37.55 Hordeum-OPAConsensus-2011-7H 31.35
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_718
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 1_1068 Marker name in barley OPA1 = 11_11068 Original SNP name = ABC03024-1-3-368 Most representative HarvEST:Barley Assembly #32 Unigene = 2033 Most representative HarvEST:Barley Assembly #35 Unigene = 718 HarvEST Unigene 35 Probe Set = Contig3024_at Unigene 35 Rice Locus = LOC_Os06g06250 Description for best rice BLAST hit to Unigene 35 member = alpha-L-fucosidase 2 precursor, putative, expressed; E value = 0 Description for best rice BLAST hit to Unigene 35 member = protein alpha-L-fucosidase 2 precursor, putative, expressed; E value = 0 BLAST hit in the rice genome = alpha-L-fucosidase 2 precursor, putative, expressed
Probe for Locus	HAR35_718
Locus	POPA1_1068
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare