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GrainGenes Marker Report: POPA1_1177

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Locus
POPA1_1177
Type
SNP
Synonym
Synonym12_11177
Chromosome
1H
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_17408
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 8 ]
Marker name in barley Pilot OPA1 = 1_1177
Marker name in barley OPA1 = 12_11177
Original SNP name = ABC07565-1-29-380
Most representative HarvEST:Barley Assembly #32 Unigene = 5516
Most representative HarvEST:Barley Assembly #35 Unigene = 17408
HarvEST Unigene 35 Probe Set = Contig7565_at
Unigene 35 Rice Locus = LOC_Os03g38540
BLAST hit in the rice genome = glutamate formiminotransferase, putative, expressed



Probe for Locus
HAR35_17408
Locus
POPA1_1177