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GrainGenes Marker Report: POPA1_1188

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Locus
POPA1_1188
Type
SNP
Chromosome
1H
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_2713
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 6 ]
Marker name in barley Pilot OPA1 = 1_1188
Most representative HarvEST:Barley Assembly #32 Unigene = 5769
Most representative HarvEST:Barley Assembly #35 Unigene = 2713
HarvEST Unigene 35 Probe Set = Contig8040_at
Unigene 35 Rice Locus = LOC_Os05g48450
BLAST hit in the rice genome = branched-chain-amino-acid aminotransferase, putative, expressed



Probe for Locus
HAR35_2713
Locus
POPA1_1188
POPA2_1486