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GrainGenes Marker Report: POPA1_1193

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Locus
POPA1_1193
Type
SNP
Chromosome
1H
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_17688
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_1193
Most representative HarvEST:Barley Assembly #32 Unigene = 6140
Most representative HarvEST:Barley Assembly #35 Unigene = 17688
HarvEST Unigene 35 Probe Set = Contig8236_at
Unigene 35 Rice Locus = LOC_Os05g33280
Description for best rice BLAST hit to Unigene 35 member = beta-propeller domains of methanol dehydrogenase type, putative, expressed; E value = 1E-133
BLAST hit in the rice genome = beta-propeller domains of methanol dehydrogenase type, putative, expressed



Probe for Locus
HAR35_17688
Locus
POPA1_1193