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GrainGenes Marker Report: POPA1_1231

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Locus
POPA1_1231
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_3950
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_1231
Most representative HarvEST:Barley Assembly #32 Unigene = 7328
Most representative HarvEST:Barley Assembly #35 Unigene = 3950
HarvEST Unigene 35 Probe Set = Contig9788_at
Unigene 35 Rice Locus = LOC_Os09g15480
Description for best rice BLAST hit to Unigene 35 member = Ser/Thr-rich protein T10 in DGCR region, putative, expressed; E value = 1E-150
BLAST hit in the rice genome = Ser/Thr-rich protein T10 in DGCR region, putative, expressed



Probe for Locus
HAR35_3950
Locus
POPA1_1231