GrainGenes Marker Report: POPA1_1389
Locus
POPA1_1389
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_8070
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 1_1389 Most representative HarvEST:Barley Assembly #32 Unigene = 14122 Most representative HarvEST:Barley Assembly #35 Unigene = 8070 HarvEST Unigene 35 Probe Set = Contig18582_at; HU03I15u_s_at Unigene 35 Rice Locus = LOC_Os01g46760 Description for best rice BLAST hit to Unigene 35 member = protein phosphatase 2C ABI1, putative, expressed; E value = 1E-105 BLAST hit in the rice genome = protein phosphatase 2C ABI1, putative, expressed
Probe for Locus
HAR35_8070
Locus
POPA2_1511 POPA1_1389
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA1_1389
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