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GrainGenes Marker Report: POPA1_1396

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Locus
POPA1_1396
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_23304
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_1396
Most representative HarvEST:Barley Assembly #32 Unigene = 15791
Most representative HarvEST:Barley Assembly #35 Unigene = 23304
HarvEST Unigene 35 Probe Set = Contig19747_at
Unigene 35 Rice Locus = LOC_Os09g20810
Description for best rice BLAST hit to Unigene 35 member = strictosidine synthase 3 precursor, putative; E value = 1E-109
BLAST hit in the rice genome = strictosidine synthase 3 precursor, putative



Probe for Locus
HAR35_23304
Locus
POPA1_1396