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GrainGenes Marker Report: POPA1_1448

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Locus	POPA1_1448
Type	SNP
Synonym	Synonym 11_11448
Chromosome	5H
Chromosome Arm	5HL
Map	Hordeum-OPAConsensus-2011-5H 131.64
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Probe	HAR35_3195
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 1_1448 Marker name in barley OPA1 = 11_11448 Original SNP name = ConsensusGBS0138-2 Most representative HarvEST:Barley Assembly #32 Unigene = 5350 Most representative HarvEST:Barley Assembly #35 Unigene = 3195 HarvEST Unigene 35 Probe Set = Contig7413_s_at Unigene 35 Rice Locus = LOC_Os03g54790 Description for best rice BLAST hit to Unigene 35 member = ATP-binding cassette sub-family B member 10, mitochondrial precursor, putative, expressed; E value = 9E-74 BLAST hit in the rice genome = ATP-binding cassette sub-family B member 10, mitochondrial precursor, putative, expressed
Probe for Locus	HAR35_3195
Locus	POPA1_1448