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GrainGenes Marker Report: POPA1_1476

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Locus
POPA1_1476
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_17875
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 1_1476
Most representative HarvEST:Barley Assembly #32 Unigene = 8105
Most representative HarvEST:Barley Assembly #35 Unigene = 17875
HarvEST Unigene 35 Probe Set = Contig10354_at; HT09B24r_s_at
Unigene 35 Rice Locus = LOC_Os09g04110
Description for best rice BLAST hit to Unigene 35 member = coatomer subunit alpha, putative, expressed; E value = 3E-32
BLAST hit in the rice genome = coatomer subunit alpha, putative, expressed



Probe for Locus
HAR35_17875
Locus
POPA1_1476
POPA2_1526