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GrainGenes Marker Report: POPA1_1497

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Locus	POPA1_1497
Type	SNP
Synonym	Other name 11_11497 BOPA1_11_11497 BOPA1_ConsensusGBS0451-1 Synonym 11_11497
Chromosome	5H
Chromosome Arm	5HL
Map	Barley, 2012 9KSNP 5H 142 [ Show all 6 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QSfnb-5H-155.13
Map Data	[ Hide all but 1 of 6 ] Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, OWB, OPA2008 Barley, SFNB QTL 2017
Species	Hordeum vulgare
Probe	HAR35_5166 i_11_11497
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	Marker name in barley Pilot OPA1 = 1_1497 [ Show all 10 ]
Probe for Locus	HAR35_5166
Locus	POPA1_1497
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare