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GrainGenes Marker Report: POPA2_0051

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Locus
POPA2_0051
Type
SNP
Chromosome
1H
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_730
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 6 ]
Marker name in barley Pilot OPA1 = 2_0051
Most representative HarvEST:Barley Assembly #32 Unigene = 1089
Most representative HarvEST:Barley Assembly #35 Unigene = 730
HarvEST Unigene 35 Probe Set = Contig1643_s_at
Unigene 35 Rice Locus = LOC_Os05g49800
BLAST hit in the rice genome = ketol-acid reductoisomerase, chloroplast precursor, putative, expressed



Probe for Locus
HAR35_730
Locus
POPA2_0051
Synonym
SynonymBCD1514
CDO1160
CDO1189
MWG632
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare