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GrainGenes Marker Report: POPA2_0087

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Locus
POPA2_0087
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14195
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_0087
Most representative HarvEST:Barley Assembly #32 Unigene = 1167
Most representative HarvEST:Barley Assembly #35 Unigene = 14195
HarvEST Unigene 35 Probe Set = Contig1737_at; HVSMEf0020A12r2_s_at
Unigene 35 Rice Locus = LOC_Os03g49380
Description for best rice BLAST hit to Unigene 35 member = lipoxygenase 4, putative, expressed; E value = 0
BLAST hit in the rice genome = lipoxygenase 4, putative, expressed



Probe for Locus
HAR35_14195
Locus
POPA2_0087