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GrainGenes Marker Report: POPA2_0158

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Locus	POPA2_0158
Type	SNP
Synonym	Other name 12_20158 BOPA2_12_20158 Synonym 12_20158
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_751 i_12_20158
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 8 ] Marker name in barley Pilot OPA1 = 2_0158 Marker name in barley OPA1 = 12_20158 Original SNP name = 139-1708 Most representative HarvEST:Barley Assembly #32 Unigene = 139 Most representative HarvEST:Barley Assembly #35 Unigene = 751 HarvEST Unigene 35 Probe Set = HY01F01u_s_at Unigene 35 Rice Locus = LOC_Os09g38030 BLAST hit in the rice genome = UTP--glucose-1-phosphate uridylyltransferase, putative, expressed
Probe for Locus	HAR35_751
Locus	POPA1_0094 POPA2_0158
Synonym	Synonym BCD9
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare