GrainGenes Marker Report: POPA2_0205
Locus
POPA2_0205
Type
SNP
Synonym
Other name 11_20205 BOPA1_11_20205 BOPA1_1578-552 Synonym 11_20205
Chromosome
7H
Chromosome Arm
7HL
Map
Barley, 2012 9KSNP 7H 74.3 Hordeum-OPA-2009-7H 83.44 Hordeum-OPA123-2008-7H 83.44 Hordeum-OPAConsensus-2011-7H 83.42
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_668 i_11_20205
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0205 Marker name in barley OPA1 = 11_20205 Original SNP name = 1578-552 Most representative HarvEST:Barley Assembly #32 Unigene = 1578 Most representative HarvEST:Barley Assembly #35 Unigene = 668 HarvEST Unigene 35 Probe Set = Contig2297_at Unigene 35 Rice Locus = LOC_Os06g23290 Description for best rice BLAST hit to Unigene 35 member = phosphatidylinositol 3- and 4-kinase family protein, expressed; E value = 0 Marker name in barley Pilot OPA2 = 2_0205 Description for best rice BLAST hit to Unigene 35 member = protein phosphatidylinositol 3- and 4-kinase family protein, expressed; E value = 0 BLAST hit in the rice genome = phosphatidylinositol 3- and 4-kinase family protein, expressed
Probe for Locus
HAR35_668
Locus
POPA2_0205 POPA1_0125
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_0205
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