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GrainGenes Marker Report: POPA2_0219

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Locus
POPA2_0219
Type
SNP
Synonym
Synonym11_20219
Chromosome
7H
Chromosome Arm
7HS
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_15031
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ]
Marker name in barley Pilot OPA1 = 2_0219
Marker name in barley OPA1 = 11_20219
Original SNP name = 1624-606
Most representative HarvEST:Barley Assembly #32 Unigene = 1624
Most representative HarvEST:Barley Assembly #35 Unigene = 15031
HarvEST Unigene 35 Probe Set = Contig2375_s_at
Unigene 35 Rice Locus = LOC_Os07g12250
Description for best rice BLAST hit to Unigene 35 member = 60S ribosomal protein L24, putative, expressed; E value = 2E-82
BLAST hit in the rice genome = 60S ribosomal protein L24, putative, expressed



Probe for Locus
HAR35_15031
Locus
POPA2_0219
POPA1_0135