GrainGenes Marker Report: POPA2_0239
Locus
POPA2_0239
Type
SNP
Synonym
Other name 11_20239 BOPA1_11_20239 BOPA1_1732-491 Synonym 11_20239
Chromosome
5H
Chromosome Arm
5HL
Map
Barley, 2012 9KSNP 5H 46.3 Hordeum-OPA-2009-5H 57.36 Hordeum-OPA123-2008-5H 57.36 Hordeum-OPAConsensus-2011-5H 47.47
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_798 i_11_20239
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0239 Marker name in barley OPA1 = 11_20239 Original SNP name = 1732-491 Most representative HarvEST:Barley Assembly #32 Unigene = 1732 Most representative HarvEST:Barley Assembly #35 Unigene = 798 HarvEST Unigene 35 Probe Set = HV11O04r_s_at Unigene 35 Rice Locus = LOC_Os06g15420 Description for best rice BLAST hit to Unigene 35 member = asparagine synthetase, putative, expressed; E value = 0 Marker name in barley Pilot OPA2 = 2_0239 Description for best rice BLAST hit to Unigene 35 member = protein asparagine synthetase, putative, expressed; E value = 0 BLAST hit in the rice genome = asparagine synthetase, putative, expressed
Probe for Locus
HAR35_798
Locus
POPA2_0239 POPA1_0152
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_0239
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