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GrainGenes Marker Report: POPA2_0311

Locus	POPA2_0311
Type	SNP
Synonym	Other name 11_20311 BOPA1_11_20311 BOPA1_2174-1345 Synonym 11_20311
Chromosome	7H
Chromosome Arm	7HL
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_15326 i_11_20311
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0311 Marker name in barley OPA1 = 11_20311 Original SNP name = 2174-1345 Most representative HarvEST:Barley Assembly #32 Unigene = 2174 Most representative HarvEST:Barley Assembly #35 Unigene = 15326 HarvEST Unigene 35 Probe Set = Contig3163_at Unigene 35 Rice Locus = LOC_Os06g49530 Description for best rice BLAST hit to Unigene 35 member = F-box domain containing protein, expressed; E value = 1E-167 BLAST hit in the rice genome = F-box domain containing protein, expressed
Probe for Locus	HAR35_15326
Locus	POPA2_0311 POPA1_0242