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GrainGenes Marker Report: POPA2_0418

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Locus
POPA2_0418
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_479
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 6 ]
Marker name in barley Pilot OPA1 = 2_0418
Most representative HarvEST:Barley Assembly #32 Unigene = 280
Most representative HarvEST:Barley Assembly #35 Unigene = 479
HarvEST Unigene 35 Probe Set = Contig426_at; Contig72_s_at; rbaal31f01_s_at
Unigene 35 Rice Locus = LOC_Os06g01630
BLAST hit in the rice genome = dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex, putative, expressed



Probe for Locus
HAR35_479
Locus
POPA1_0372
POPA2_0418
Synonym
SynonymCDO476
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare