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GrainGenes Marker Report: POPA2_0424

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Locus	POPA2_0424
Type	SNP
Synonym	Other name 12_20424 BOPA2_12_20424 Synonym 12_20424
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_15837 i_12_20424
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0424 Marker name in barley OPA1 = 12_20424 Original SNP name = 2835-1501 Most representative HarvEST:Barley Assembly #32 Unigene = 2835 Most representative HarvEST:Barley Assembly #35 Unigene = 15837 HarvEST Unigene 35 Probe Set = Contig4024_at; Contig4025_s_at Unigene 35 Rice Locus = LOC_Os07g32570 Description for best rice BLAST hit to Unigene 35 member = OsAPRL1 - Oryza sativa adenosine 5'-phosphosulfate reductase-like, expressed; E value = 0 BLAST hit in the rice genome = OsAPRL1 - Oryza sativa adenosine 5'-phosphosulfate reductase-like, expressed
Probe for Locus	HAR35_15837
Locus	POPA2_0424