GrainGenes Marker Report: POPA2_0426
Locus
POPA2_0426
Type
SNP
Chromosome
4H
Chromosome Arm
4HL
Map
Barley-Core-2014_4H 53.87 Hordeum-OPA-2009-4H 50.4 Hordeum-OPA123-2008-4H 50.4 Hordeum-OPAConsensus-2011-4H 56.22 Hordeum-OWB-OPA2008-4H 52.267
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, OWB, OPA2008 Barley, USDA Core, 2014 Consensus
Probe
HAR35_15809
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0426 Most representative HarvEST:Barley Assembly #32 Unigene = 2850 Most representative HarvEST:Barley Assembly #35 Unigene = 15809 HarvEST Unigene 35 Probe Set = Contig4123_at; HVSMEa0002E06r2_s_at Unigene 35 Rice Locus = LOC_Os03g21720 Description for best rice BLAST hit to Unigene 35 member = vacuolar sorting receptor 1 precursor, putative, expressed; E value = 0 Marker name in barley Pilot OPA2 = 2_0426 Original SNP name = 2850-147 HarvEST Unigene 35 Probe Set = Contig4123_at, HVSMEa0002E06r2_s_at Description for best rice BLAST hit to Unigene 35 member = protein vacuolar sorting receptor 1 precursor, putative, expressed; E value = 0 BLAST hit in the rice genome = vacuolar sorting receptor 1 precursor, putative, expressed
Probe for Locus
HAR35_15809
Locus
POPA2_0426
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_0426
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