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GrainGenes Marker Report: POPA2_0483

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Locus	POPA2_0483
Type	SNP
Chromosome	7H
Chromosome Arm	7HL
Map	Barley-Core-2014_7H 157.86 Hordeum-OPA-2009-7H 149.8 Hordeum-OPA123-2008-7H 149.8 Hordeum-OPAConsensus-2011-7H 152.41
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, USDA Core, 2014 Consensus
Probe	HAR35_15821
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 2_0483 Most representative HarvEST:Barley Assembly #32 Unigene = 3133 Most representative HarvEST:Barley Assembly #35 Unigene = 15821 HarvEST Unigene 35 Probe Set = Contig4477_at Unigene 35 Rice Locus = LOC_Os03g22490 Description for best rice BLAST hit to Unigene 35 member = heavy metal-associated domain containing protein, expressed; E value = 7E-93 Marker name in barley Pilot OPA2 = 2_0483 Original SNP name = 3133-224 Description for best rice BLAST hit to Unigene 35 member = protein heavy metal-associated domain containing protein, expressed; E value = 7E-93 BLAST hit in the rice genome = heavy metal-associated domain containing protein, expressed
Probe for Locus	HAR35_15821
Locus	POPA2_0483
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare